====== Publications ======

===== Joint journal papers  =====

  * M. Dorier, S. Ibrahim, G. Antoniu, R.Ross. //Using Formal Grammars to Predict I/O Behaviors in HPC: the Omnisc’IO Approach.//IEEE Transactions on Parallel and Distributed Systems (TPDS), 2015. [[https://hal.inria.fr/hal-01238103|link]]

  * M. Dorier, G. Antoniu, F. Cappello, M. Snir, R. Sisneros, O. Yildiz, S. Ibrahim, T. Peterka, L. Orf. //Damaris: Addressing Performance Variability in Data Management for Post-Petascale Simulations//. ACM Transactions on Parallel Computing (ToPC), 2016.[[https://hal.inria.fr/hal-01353890|link]]

  * P. Matri, Y. Alforov, A. Brandon, M. S. Pérez, A. Costan, G. Antoniu, M. Kuhn, P. Carns, T. Ludwig. Mission possible: Unify HPC and Big Data stacks towards application-defined blobs at the storage layer. Future Generation Computer Systems (FGCS), July 2018. DOI: 10.1016/j.future.2018.07.035. [[https://doi.org/10.1016/j.future.2018.07.035|link]]
===== Joint conference papers =====

  * M. Dorier, R. Sisneros, T. Peterka, G. Antoniu, D. Semeraro. //Damaris/Viz, a Nonintrusive, Adaptable and User-Friendly In Situ Visualization Framework//. in Proc. of IEEE LDAV 2013 (Atlanta, GA, USA, 13-14 October 2013). [[http://hal.inria.fr/hal-00859603|link]]

  * M. Dorier, G. Antoniu, R. Ross, D. Kimpe, S. Ibrahim. //CALCioM: Mitigating I/O Interference in HPC Systems through Cross-Application Coordination.// in Proc. of IEEE IPDPS 2014 (Phoenix, AZ, USA, 19-24 May 2014). [[http://hal.inria.fr/hal-00916091|link]]

  * R. Tudoran, K. Keahey, P. Riteau, S. Panitkin and G. Antoniu. //Evaluating
Streaming Strategies for Event Processing across Infrastructure Clouds.// In Proc. of the 14th IEEE/ACM CCGrid 2014 (Chicago, IL, US, May 2014). [[http://www.mcs.anl.gov/papers/P5108-0314.pdf|link]]

  * M. Dorier, S. Ibrahim, G. Antoniu, R. Ross. //Omnisc'IO: A Grammar-Based Approach to Spatial and Temporal I/O Patterns Prediction.// In Proc. of ACM/IEEE SC 2014 (New Orleans, LA, USA, November 2014). [[https://hal.inria.fr/hal-01025670v1|link]]

  * O. Yildiz, M. Dorier, S. Ibrahim, R. Ross, G. Antoniu. //On the Root Causes of Cross-Application I/O Interference in HPC Storage Systems.// In Proc. of IEEE IPDPS 2016 - The 30th IEEE International Parallel and Distributed Processing Symposium, May 2016, Chicago, United States.[[https://hal.inria.fr/hal-01351919|link]]

  * M. Dorier, R. R. Sisneros, L. Bautista-Gomez, T. Peterka, L. Orf, L. Rahmani,
 G. Antoniu, L. Bougé, Adaptive Performance-Constrained In Situ Visualization of Atmospheric Simulations, in : Cluster 2016 - The IEEE 2016 International Conference on Cluster Computing, Taipei, Taiwan, 2016. [[https://hal.inria.fr/hal-01351919|link]]

  * P. Matri, Y. Alforov, A. Brandon, M. Kuhn, P. Carns, T. Ludwig. Could Blobs fuel Storage-Based Convergence Between HPC and Big Data?. in Proc. of IEEE Cluster 2017 (Honolulu, HI, USA, 5-8 September 2017). [[https://hal.inria.fr/hal-01617655/|link]]

  * O.-C. Marcu, A. Costan, G. Antoniu, M. S. Pérez, B. Nicolae, R. Tudoran, S. Bortoli. KerA: Scalable Data Ingestion for Stream Processing. In Proc. ICDCS 2018 – 38th IEEE International Conference on Distributed Computing Systems, Jul 2018, Vienna, Austria. [[https://hal.inria.fr/hal-01773799/|link]]

  * P. Matri, P. H. Carns, R. Ross, A. Costan, M. S. Pérez, G. Antoniu. SLoG: Large-Scale Logging Middleware for HPC and Big Data Convergence. In Proc. ICDCS 2018 – 38th IEEE International Conference on Distributed Computing Systems, Jul 2018, Vienna, Austria, p. 1507-1512. [[https://ieeexplore.ieee.org/document/8416419/|link]]
===== Partner papers influenced by the collaboration =====

  * R. Tudoran, A. Costan, R. Wang, L. Boug ́e, G. Antoniu. Bridging Data in the Clouds: An Environment-Aware System for Geographically Distributed Data Transfers. In Proc. of the 14th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid 2014), Chicago, IL, USA, May 2014. [[https://hal.inria.fr/hal-00978153|link]]

  * R. Tudoran, A. Costan, G. Antoniu. Transfer as a Service: Towards a Cost-Effective Model for Multi-Site Cloud Data Management. In Proc. 33rd IEEE Symposium on Reliable Distributed Systems (SRDS 2014) , Oct 2014, Nara, Japan. 2014.[[https://hal.inria.fr/hal-01023282|link]]

  * L. Pineda-Morales, A. Costan, G. Antoniu. Towards Multi-Site Metadata Management for Geo- graphically Distributed Cloud Workflows. In Proceedings of IEEE Cluster 2015, September 2015, Chicago, IL, USA.

  * O. Yildiz, A. Chi Zhou, S. Ibrahim. Eley: On the Effectiveness of Burst Buffers for Big Data Processing in HPC Systems. In Proceedings of IEEE Cluster 2017, September 2017, Hawaii, HI, USA.

  * N. Cheriere, G. Antoniu. How Fast Can One Scale Down a Distributed File System? In proceedings of IEEE BigData 2017, December 2017, Boston, MA, USA.
===== Joint workshop papers =====

  * M. Dorier, M. Dreher, T. Peterka, J. Wozniak, G. Antoniu, B. Raffin. //Lessons Learned from Building In Situ Coupling Frameworks.// to appear in proceedings of ISAV 2015 (held in conjunction with ACM/IEEE SC 15, Austin, TX, USA, November 2015).

===== Posters =====

  * M. Dorier, advised by G. Antoniu. and L. Bougé. //Efficient I/O using Dedicated Cores in Large-Scale HPC Simulations.// PhD forum of IPDPS 2013 (Boston, MA, USA, 20-24 May 2013). [[http://hal.inria.fr/hal-00831296|Link]].

  * L. Rahmani, advised by G. Antoniu and L. Bougé. //Towards Smart Visualization for HPC Simulations.// Phd forum of IPDPS 2014 (Phoenix, AZ, USA, May 2014). [[http://damaris.gforge.inria.fr/lib/exe/fetch.php?media=wiki:rahmani_ipdps14_poster.pdf|link]]
 
  * Luis Pineda-Morales, Balaji Subramaniam, Kate Keahey, Gabriel Antoniu, Alexandru Costan, Shaowen Wang, Anand Padmanabhan and Aiman Soliman. Scaling Smart Appliances for Spatial Data Synthesis. SC'15 - 27th ACM/IEEE International Conference for High Performance Computing, Networking, Storage and Analysis, Austin, Nov. 2015.

  * N. Cheriere, M. Dorier. Accelerating the Scatter Operation on Dragonfly Networks, SC16 - ACM/IEEE International Conference in Supercomputing, November 2016, Salt Lake City. Poster. **3rd Award at the Graduate Student Research Competition.**
===== Research Reports =====

  * M. Dorier, S. Ibrahim, G. Antoniu, R. Ross. //On the Use of Formal Grammars to Predict HPC I/O Behaviors//. Inria RR-8725. [[https://hal.inria.fr/hal-01149941v2|link]]

  * N. Cheriere, M. Dorier, G. Antoniu. //A Lower Bound for the Commission Times in Replication-Based Distributed Storage Systems//. Inria RR-9186. [[https://hal.archives-ouvertes.fr/hal-01817638|link]]

===== PhD theses related to the collaboration =====

  * Matthieu Dorier. Addressing the Challenges of I/O Variability in Post-Petascale HPC Simulations. PhD thesis, ENS Rennes, 2014. [[https://tel.archives-ouvertes.fr/tel-01099105|link]]. Matthieu is now holding a permanent position at ANL as a Software Development Specialist.

  * Radu Tudoran. High-Performance Big Data Management Across Cloud Data Centers. PhD thesis, ENS Rennes, 2014. [[https://tel.archives-ouvertes.fr/tel-01093767|link]]

  * Luis Pineda-Morales. Efficient Support for Data-Intensive Scientific Workflows on Geo-Distributed Clouds. PhD thesis, Insa Rennes, 2017. 

  * Orçun Yildiz. Efficient Big Data Processing on Large-Scale Shared Platforms: Managing I/Os and Failures. PhD thesis, ENS Rennes, 2017. Orçun has subsequently been hired as a postdoc at ANL. 

  * Pierre Matri.  Týr: Storage-Based HPC and Big Data Convergence Using Transactional Blobs. PhD thesis, UPM, 2018. Pierre has subsequently been hired as a postdoc at ANL.