Santiago Videla

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Ph.D Student, IRISA (CNRS & Univ Rennes 1), Inria Rennes


Dyliss team, Irisa / Inria Rennes-Bretagne Atlantique,
Campus de Beaulieu, 35042 Rennes Cedex, France.
Tel: +33 (0) 2 99 84 71 29
Fax: +33 (0) 2 99 84 71 71
Email: santiago.videla (at) irisa.fr
CV: English | French

Research


Ph.D thesis (09/2011 - 08/2014)

Reasoning on the response of logical signaling networks with Answer Set Programming

Publications

Videla, S., Guziolowski, C., Eduati, F., Thiele, S., Gebser, M., Nicolas, J., Saez-Rodriguez, J., Schaub T. & Siegel A. (2014). Learning Boolean logic models of signaling networks with ASP. Theoretical Computer Science, in press. (doi)

Kaminski R., Schaub T., Siegel A. & Videla S. (2013). Minimal Intervention Strategies in Logical Signaling Networks with Answer Set Programming. Theory and Practice of Logic Programming,13(4-5), 675-690. (doi)

Guziolowski, C., Videla, S., Eduati, F., Thiele, S., Cokelaer, T., Siegel, A., & Saez-Rodriguez, J. (2013). Exhaustively characterizing feasible logic models of a signaling network using Answer Set Programming. Bioinformatics, 29(18), 2320–2326. (doi)

Videla, S., Guziolowski, C., Eduati, F., Thiele, S., Grabe, N., Saez-Rodriguez, J., & Siegel, A. Revisiting the Training of Logic Models of Protein Signaling Networks with Answer Set Programming. 10th International Conference on Computational Methods in Systems Biology, LNCS 7605, pp. 342–361. Springer, Heidelberg (2012) (doi)
 
Awards

Best Paper at "The 10th Conference on Computational Methods in Systems Biology, 3-5 October 2012, The Royal Society, London, UK". Santiago Videla, Carito Guziolowski, Federica Eduati, Sven Thiele, Niels Grabe, Julio Saez-Rodriguez and Anne Siegel. Revisiting the Training of Logic Models of Protein Signaling Networks with a Formal Approach based on Answer Set Programming.