Collab. & Grants

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International

Collaborations
Funding

Methods (France)

Collaborations
  • LINA, Univ. Nantes. The "Combi team" is involved in most of methodological and application projects of the Dyliss team. [Integration, dynamical system]
  • IRCCyN, Ecole centrale Nantes. [modelling]
  • I3S, Univ. Nice. [modelling]
  • I2M, Univ Marseille [semantic web, discrete boolean network]
  • LORIA, Orpailleur, Nancy. [semantic web, formal concept analysis]
Funding
  • Confocal. Enrichment of formal concept analysis by symbolic knowledge extracted from ontologies. PEPS Fascido. CNRS.
  • [ended] Biotempo. Methodological project on the modelling of biological systems. ANR Blanc SIMI-2 (Informatique) 2011-2014.

Marine Biology

Collaborations

Funding

  • IDEALG. Fundamental research and valorization of macro-alguae. Investissement avenir Biotechnologies et Bioressources 2011-2021.
  • AlgaeInSilico. Predicting and optimizing the productivity of macroalgae. Inria project lab. 2014-2018.
  • Samosa. Synechococcus as a model genus for studying adaptation of marine phytoplankton to environmental changes. ANR BioAdapt. 2013-2017.
  • [ended] VAG. Characterize and identify viral sequences in marine metagenomes. PEPS BMI.
  • [ended] Pelican. Large-scale study of light-harvesting complexes gene diversity. ANR (Genomique) 2010-2013.
  • [ended] Sea Urchin. Effect of eIF4E/ and 4E-BP in the initiation of cell-cycle.  Funded by a PEPS CNRS (Quantoursin) in 2010-2011 and a support from "Ligue contre le cancer" in 2011-2012.
  • [ended] Lepidolf. A better understanding of olfactory mechanisms in insects. ANR Blanc Jeunes chercheurs 2009-2013.

Environmental microbiology

Collaborations
Funding
  • CIRIC center "omics research line". Cooperation with Univ. Chile. Methods for the identification of biomarkers and softwares for biochip design. Co-funded by Inria and CORFO-chile from 2012 to 2022.
  • ADT Inria program. Design of IDchips for the identification of biomarkers associated to complex phenotypes.
  • [ended] AquaSyst. Combining Environmental genomics and Systems biology for the undersanding of aquifere denitrification. PEPII CNRS 2011-2012.

Animal & human biology

Collaborations
Funding
  • TGFbeta systems biology. Microenvironment and Cancer: regulation of the activity of the TGFbeta transcription factor. Cancer Plan. 2016-2018.
  • Mecagenotox. Bioactivation of environmental contaminants during hepatic fibrosis. ANSES. 2013-2016.
  • [ended] MiRNAdapt. MicroRNA and phenotypic plasticity studied on pea aphids. ANR Blanc SVE6 (Génomique, génétique, bioinformatique, biologie systémique) 2012-2016.
  • [ended] FatInteger. Key regulators of fatty acid plasticity. ANR Blanc SVE7 (biodiversité, évolution, écologie et agronomie) 2012-2015.
  • [ended] Lepidolf. A better understanding of olfactory mechanisms in insects. ANR Blanc Jeunes chercheurs 2009-2013.
  • [ended] Basic Lab. Biocellular Assistant on a Silicium Intelligent Chip. CPER Region Bretagne-Rennes 2009-2013.

Transfer

Transfert
  • CIRIC-center "omics research line". Softwares for biochip design. Co-funded by Inria and CORFO-chile from 2012 to 2022.
  • [ended] Inria Bioressources. A portal for the technological transfer of INRIA’s research teams, co-supervised by GenOuest platform and J. Nicolas from Dyliss. Funded by the Inria ADT program.