SCAN
SWISS-PROT
(release 36) with SAMBA
Smith and Waterman Algorithm
Search title
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Sequence file name
Fasta format only (file must contain only one sequence) -
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paste mode
Parameters
Matrix
BLOSUM62
BLOSUM50
PAM120
PAM250
Cut Gap
20
19
18
17
16
15
14
13
12
11
10
9
8
7
6
5
4
3
2
1
Ext Gap
20
19
18
17
16
15
14
13
12
11
10
9
8
7
6
5
4
3
2
1
Alignments
50
30
20
10
5